MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6027_ses-2_T1w.
  • Date and time: 2022-11-14, 20:05.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv1.0278544792160687
cnr1.309103060451741
efc0.6063996608979507
fber1446.6715047479913
fwhmavg4.43059
fwhmx4.32627
fwhmy5.05747
fwhmz3.90803
icvscsf0.2061416029372848
icvsgm0.3926000654650606
icvswm0.4012583315976546
inumed1.985136866569519
inurange0.9919184088706969
qi10.0004924904409740269
qi20.0018907384691685554
rpvecsf27.179521137725118
rpvegm14.260355022163798
rpvewm17.197132460386232
sizex176
sizey256
sizez256
snrcsf3.174371574855017
snrgm7.842785506319318
snrtotal9.836610953312272
snrwm18.492675778762482
snrdcsf36.904188528850604
snrdgm76.31548036209375
snrdtotal67.97552447197161
snrdwm90.70690452497045
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk121.4490193344971
summarybgmad7.2229339792036305
summarybgmean18.085916776342096
summarybgmedian14.41025659814477
summarybgn2493757.0
summarybgp054.820512883365154
summarybgp9540.92307745665312
summarybgstdv16.041545432146982
summarycsfk-0.15464087374223645
summarycsfmad129.40456455373243
summarycsfmean431.458277232188
summarycsfmedian406.8718001767993
summarycsfn22691.0
summarycsfp05259.9487213380635
summarycsfp95666.2820599693805
summarycsfstdv128.1711434831249
summarygmk-0.37126146671825166
summarygmmad114.42648040738383
summarygmmean848.2963063698116
summarygmmedian841.3846263550222
summarygmn11546.0
summarygmp05686.2820602301508
summarygmp951033.512833988294
summarygmstdv107.27670528444807
summarywmk0.8394821796915406
summarywmmad48.65976575463499
summarywmmean1005.2041138718315
summarywmmedian1000.0512950904667
summarywmn226952.0
summarywmp05924.974371034652
summarywmp951103.0256554074585
summarywmstdv54.07811740334996
tpmoverlapcsf0.14442883431911469
tpmoverlapgm0.43092095851898193
tpmoverlapwm0.49307548999786377
wm2max0.5775877956921767
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime12:37:30.415000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.0190733, 0.987232, 0.15814, -0.0120654, 0.158385, -0.987304]
ImageOrientationTextSag>Cor(1.0)>Tra(0.9)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.262
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0416125
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber20
ShimSetting[2622, 5305, -7456, -81, 27, -851, 218, -229]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp275.901
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumbfe7bcf1f70a3d37054c70e2d1760acb
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.